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Accelrys pipeline pilot v7.5
Pipeline Pilot V7.5, supplied by Accelrys, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pipeline+pilot+(v7%2E5/pipeline+pilot+version+7+5/ppr0693549-162-6-9
Average 90 stars, based on 1 article reviews
pipeline pilot v7.5 - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Design, synthesis and biological activities of piperidine-spirooxadiazole derivatives as α7 nicotinic receptor antagonists.
Article Snippet: a: 7 nicotinic acetylcholine receptors (nAChRs) expressed in the nervous and immune systems have been suggested to play important roles in the control of inflammation.. However, the lack of antagonist tools specifically inhibiting a7 nAChR impedes the validation of the channel as therapeutic target.. To discover a selective a7 antagonist, we started a pharmacophore-based virtual screening and identified a piperidine-spirooxadiazole derivative T761e0184 that acts as a a7 antagonist.

Article Title: Identification and characterization of benzo[d]oxazol-2(3H)-one derivatives as the first potent and selective small-molecule inhibitors of chromodomain protein CDYL.
Article Snippet: Chemical probes of epigenetic ‘readers’ of histone post-translational modifications (PTMs) have become powerful tools for mechanistic and functional studies of their target proteins in physiology and pathology.. However, only limited ‘reader’ probes have been developed, which restricted our understanding towards these macromolecules and their roles in cells or animals.. Here, we reported a structure-guided approach to develop and characterize benzo [d]oxazol-2(3H)-one analogs as the first potent and selective small-molecule inhibitors of chromodomain Y-like (CDYL), a histone methyllysine reader protein.

Article Title: Small-molecule compounds targeting the STAT3 DNA-binding domain suppress survival of cisplatin-resistant human ovarian cancer cells by inducing apoptosis.
Article Snippet: In brief, the database was prepared by using a homemade protocol in Pipeline Pilot v7.5 (PP 7.5, Accelrys, San Diego, CA, USA), in which the molecules formed 3D coordinates to remove counter ions, minimize and standardize.

Article Title: Discovery of novel multidrug resistance protein 4 (MRP4) inhibitors as active agents reducing resistance to anticancer drug 6-Mercaptopurine (6-MP) by structure and ligand-based virtual screening
Article Snippet: The compound database was prepared with an in-house protocol developed in Pipeline Pilot v7.5 (PP 7.5, Accelrys Software, Inc., San Diego, CA, USA.), in which the chemical structures formed 3D coordinates, were stripped of counter ions, minimized, and standardized.

Article Title: Tumor-resident microbiota contributes to colorectal cancer liver metastasis by lactylation and immune modulation
Article Snippet: All compounds were rst treated with Pipeline Pilot v7.5 (Accelrys) to generate 3D coordination, strip salt, minimize molecule energy, and standardize the chemical table coding.

Article Title: Bisphenol AF promotes inflammation in human white adipocytes
Article Snippet: Images were analyzed using custom algorithms developed with the Pipeline Pilot (v7.5) software platform (Accelrys).

Selection:

Article Title: Design, synthesis and biological activities of piperidine-spirooxadiazole derivatives as α7 nicotinic receptor antagonists.
Article Snippet: a: 7 nicotinic acetylcholine receptors (nAChRs) expressed in the nervous and immune systems have been suggested to play important roles in the control of inflammation.. However, the lack of antagonist tools specifically inhibiting a7 nAChR impedes the validation of the channel as therapeutic target.. To discover a selective a7 antagonist, we started a pharmacophore-based virtual screening and identified a piperidine-spirooxadiazole derivative T761e0184 that acts as a a7 antagonist.

Article Title: Identification and characterization of benzo[d]oxazol-2(3H)-one derivatives as the first potent and selective small-molecule inhibitors of chromodomain protein CDYL.
Article Snippet: Chemical probes of epigenetic ‘readers’ of histone post-translational modifications (PTMs) have become powerful tools for mechanistic and functional studies of their target proteins in physiology and pathology.. However, only limited ‘reader’ probes have been developed, which restricted our understanding towards these macromolecules and their roles in cells or animals.. Here, we reported a structure-guided approach to develop and characterize benzo [d]oxazol-2(3H)-one analogs as the first potent and selective small-molecule inhibitors of chromodomain Y-like (CDYL), a histone methyllysine reader protein.

Article Title: Small-molecule compounds targeting the STAT3 DNA-binding domain suppress survival of cisplatin-resistant human ovarian cancer cells by inducing apoptosis.
Article Snippet: In brief, the database was prepared by using a homemade protocol in Pipeline Pilot v7.5 (PP 7.5, Accelrys, San Diego, CA, USA), in which the molecules formed 3D coordinates to remove counter ions, minimize and standardize.

Article Title: Discovery of novel multidrug resistance protein 4 (MRP4) inhibitors as active agents reducing resistance to anticancer drug 6-Mercaptopurine (6-MP) by structure and ligand-based virtual screening
Article Snippet: The compound database was prepared with an in-house protocol developed in Pipeline Pilot v7.5 (PP 7.5, Accelrys Software, Inc., San Diego, CA, USA.), in which the chemical structures formed 3D coordinates, were stripped of counter ions, minimized, and standardized.

Article Title: Tumor-resident microbiota contributes to colorectal cancer liver metastasis by lactylation and immune modulation
Article Snippet: All compounds were rst treated with Pipeline Pilot v7.5 (Accelrys) to generate 3D coordination, strip salt, minimize molecule energy, and standardize the chemical table coding.

Article Title: Bisphenol AF promotes inflammation in human white adipocytes
Article Snippet: Images were analyzed using custom algorithms developed with the Pipeline Pilot (v7.5) software platform (Accelrys).



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